| MirGeneDB ID | Npo-Mir-1993 |
|---|---|
| Family name | MIR-1993 (all species) |
| Seed | AUUAUGC |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bpl-Mir-1993 Cbr-Mir-1993 Cel-Mir-1993 Cgi-Mir-1993 Cte-Mir-1993 Dma-Mir-1993 Dpu-Mir-1993 Efe-Mir-1993-P1 Efe-Mir-1993-P2 Esc-Mir-1993 Isc-Mir-1993 Lan-Mir-1993 Lgi-Mir-1993 Lpo-Mir-1993-P3 Lpo-Mir-1993-P4 Lpo-Mir-1993-P5 Obi-Mir-1993 Ovu-Mir-1993 Sme-Mir-1993-P6 Sme-Mir-1993-P7 |
| Node of Origin (locus) | Protostomia |
| Node of Origin (family) | Protostomia |
| Genome context (GCA_018389105_NPO) |
JACATO010000926.1: 735993-736050 [+] Ensembl |
| Precursor (pre-Mir +30nt flank) | AUUUCUACCAGAAAGUGGCUCCUGCAGUUUUCGGGAAUAGCGGCAUAAUGCUGUAAAUUUGGAUCGUAUUAUGCUGUUAUUCACGAGAUUCUCGAGUCAGCAGACGACAAGAGAGUCUGet precursor sequence |
| Structure | 10 20 30 40 50 AUUUCUACCAGAAAGUG----| CUGCAGU G UGUAAA GCUC UUUCG GAAUAGCGGCAUAAUGC U UGAG AGAGC CUUAUUGUCGUAUUAUG U UCUGAGAGAACAGCAGACGAC^ CUCUU-- A CUAGGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Npo-Mir-1993_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UCGGGAAUAGCGGCAUAAUGCU -22
Get sequence
|
| Mature sequence | Npo-Mir-1993_3p (predicted) |
| mirBase accession | None |
| Sequence |
36- UAUUAUGCUGUUAUUCACGAGA -58
Get sequence
|
