Mir-770

MirGeneDB ID

Mmu-Mir-770

Family name

MIR-770 (all species)

Seed

UGGGCCU

Species

House mouse (Mus musculus)

MiRBase ID

mmu-mir-770

Paralogues

Orthologues

Hsa-Mir-770 Mml-Mir-770 Rno-Mir-770

Node of Origin (locus)

Euarchontoglires

Node of Origin (family)

Euarchontoglires

Genome context
(mm10)

chr12: 109563710-109563765 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-770)

Mir-770 chr12: 109563710-109563765 [+] UCSC Ensembl
Mir-673 chr12: 109572004-109572066 [+] UCSC Ensembl
Mir-493 chr12: 109580243-109580305 [+] UCSC Ensembl
Mir-337-as chr12: 109585813-109585873 [-] UCSC Ensembl
Mir-337 chr12: 109585818-109585871 [+] UCSC Ensembl
Mir-540 chr12: 109586085-109586143 [+] UCSC Ensembl
Mir-431 chr12: 109590459-109590522 [+] UCSC Ensembl
Mir-433 chr12: 109591729-109591802 [+] UCSC Ensembl
Mir-127 chr12: 109592854-109592909 [+] UCSC Ensembl
Mir-136-v2 chr12: 109595331-109595386 [+] UCSC Ensembl
Mir-136-v1 chr12: 109595331-109595386 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

ACCUUGUCAGAAGCCACCUUCUGUGCCCCCAGCACCACGUGUCUGGGCCACGUGAGCAACGCCACGUGGGCCUGACGUGGAGCUGGGGCCGCAGGGGUCUGAUGGCCUCCUGUUUC

Get precursor sequence

Structure

        10          20        30        40        50        
ACCUUGUCAGAAGCCAC--|       C       A      GUCU  G      GAGC 
                   CUUCUGUG CCCCAGC CCACGU    GG CCACGU    A
                   GGGGACGC GGGGUCG GGUGCA    CC GGUGCA    A
CUUUGUCCUCCGGUAGUCU^       C       A      GU--  G      CCGC 
    110       100        90        80          70        60

Deep sequencing

Go to detailed chart

Comment

The Drosha cut in the rodents is +3 relative to the primates.

3' NTU

Motifs

Tissue expression

Bo	Br	Br	Ce	Em	Em	He	In	Ki	Li	Lu	Mu	Ov	Pa	Sk	Sp	Sp	Te

Star sequence

Mmu-Mir-770_5p*

mirBase accession

MIMAT0004822

Sequence

0- AGCACCACGUGUCUGGGCCACGU -23

Get sequence

Proposed targets

microrna.org: MIMAT0004822
TargetScanVert: mmu-miR-770-5p
miRDB: MIMAT0004822

Mature sequence

Mmu-Mir-770_3p

mirBase accession

MIMAT0003891

Sequence

35- GUGGGCCUGACGUGGAGCUGG -56

Get sequence

Proposed targets

microrna.org: MIMAT0003891
miRDB: MIMAT0003891