MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-3101-v1

Family name MIR-3101 (all species)
Seed AGCUUUG
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-3101
Paralogues Mmu-Mir-3101-v2 
Orthologues
Node of Origin (locus) M. musculus
Node of Origin (family) M. musculus
Genome context
(mm10)		 chr7: 27176020-27176078 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-3101-v1)		 Mir-3101-v2 chr7: 27176019-27176079 [-] UCSC Ensembl
Mir-3101-v1 chr7: 27176020-27176078 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCAGUGGGGCAGCAGGUGGGGUAGGUAGCAGGUACCAUUGACUAAAGCUAGUACUAUAGGCUUGCCUCUAGCUUUGGUGGAUGGUCUUUGCUAAGUUCUCUGCCAACCCAGCAGUGAGA
Get precursor sequence
Structure
        10         20        30        40        50         
UCAGUGGGGCAGCAGGU-|   UAGG       U      G           UACUAUA 
                  GGGG    UAGCAGG ACCAUU ACUAAAGCUAG       G
                  UCUC    AUCGUUU UGGUAG UGGUUUCGAUC       G
AGAGUGACGACCCAACCG^   UUGA       C      G           UCCGUUC 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-3101-v1_5p*
mirBase accessionMIMAT0014921
Sequence 
0- GGUACCAUUGACUAAAGCUAGU -22
Get sequence
Proposed targets TargetScanVert: mmu-miR-3101-5p
miRDB: MIMAT0014921
Mature sequence

Mmu-Mir-3101-v1_3p
mirBase accessionMIMAT0014922
Sequence 
38- UAGCUUUGGUGGAUGGUCUUU -59
Get sequence
Proposed targets miRDB: MIMAT0014922