MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-147-v1

Family name MIR-147 (all species)
Seed UGUGCGG
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-147
Paralogues Mmu-Mir-147-v2 
Orthologues Aca-Mir-147-v1  Ami-Mir-147-v1  Bta-Mir-147  Cli-Mir-147  Cmi-Mir-147  Cpi-Mir-147-v1  Cpo-Mir-147-v1  Dno-Mir-147-v1  Gga-Mir-147  Hsa-Mir-147-v1  Lch-Mir-147  Loc-Mir-147-v1  Mal-Mir-147-v1  Mdo-Mir-147  Mml-Mir-147  Oan-Mir-147  Ocu-Mir-147  Pbv-Mir-147-v1  Pma-Mir-147  Rno-Mir-147-v1  Spt-Mir-147  Tgu-Mir-147  Tni-Mir-147 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mm10)		 chr2: 122640813-122640871 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-147-v1)		 Mir-147-v1 chr2: 122640813-122640871 [+] UCSC Ensembl
Mir-147-v2 chr2: 122640814-122640870 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCUCUUCCAAAGAACACUCUAUGAAUCUAGUGGAAACAUUUCUGCACAAACUAGAUGUUGAUGCCAGUGUGCGGAAAUGCUUCUGCUACAUUUGUAGGGUUUGCCUGCAUUCUUUGGA
Get precursor sequence
Structure
        10          20        30        40        50         
CUCUCUUCCAAAGAACA--|    UG   C   UG   A            AACUAGAUG 
                   CUCUA  AAU UAG  GAA CAUUUCUGCACA         \
                   GGGAU  UUA AUC  CUU GUAAAGGCGUGU         U
AGGUUUCUUACGUCCGUUU^    GU   C   GU   C            GACCGUAGU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-147-v1_5p* (predicted)
mirBase accessionMIMAT0017269
Sequence 
0- GUGGAAACAUUUCUGCACAAACU -23
Get sequence
Proposed targets TargetScanVert: mmu-miR-147-5p
miRDB: MIMAT0017269
Mature sequence

Mmu-Mir-147-v1_3p
mirBase accessionMIMAT0004857
Sequence 
37- GUGUGCGGAAAUGCUUCUGCUA -59
Get sequence
Proposed targets microrna.org: MIMAT0004857
TargetScanVert: mmu-miR-147-3p
miRDB: MIMAT0004857