Mir-506-P9

MirGeneDB ID

Mml-Mir-506-P9

Family name

MIR-506 (all species)

Seed

ACUCAAA

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-888

Paralogues

Mml-Mir-506-P1 Mml-Mir-506-P2 Mml-Mir-506-P3 Mml-Mir-506-P4d Mml-Mir-506-P4e Mml-Mir-506-P4f Mml-Mir-506-P5 Mml-Mir-506-P6a Mml-Mir-506-P6b1 Mml-Mir-506-P6b2 Mml-Mir-506-P6c1 Mml-Mir-506-P6c2 Mml-Mir-506-P7a Mml-Mir-506-P8 Mml-Mir-506-P10 Mml-Mir-506-P11 Mml-Mir-506-P12 Mml-Mir-506-P13 Mml-Mir-506-P29

Orthologues

Hsa-Mir-506-P9

Node of Origin (locus)

Catarrhini

Node of Origin (family)

Eutheria

Genome context
(rheMac8_trace)

chrX: 139702265-139702321 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-506-P9)

Mir-506-P13 chrX: 139700246-139700302 [-] UCSC Ensembl
Mir-506-P10 chrX: 139701739-139701795 [-] UCSC Ensembl
Mir-506-P9 chrX: 139702265-139702321 [-] UCSC Ensembl
Mir-506-P11 chrX: 139703819-139703875 [-] UCSC Ensembl
Mir-506-P12 chrX: 139704349-139704405 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCACAAUUAGCCAUGUCGUGGGCAGUGCCCUACUCAAAAAGCUGUCAGUCACUUAUGUUACAUGUGACUGACACCUCUUUAGAUGAAGGAAGGCUCAUCAAGUACAGUUUUGUGGUG

Get precursor sequence

Structure

        10          20        30         40        50        
CCACAAUUAGCCAUGUC--|     AGUG  CUAC  -   A  C          UUAUG 
                   GUGGGC    CC    UC AAA AG UGUCAGUCAC     \
                   UACUCG    GG    AG UUU UC ACAGUCAGUG     U
GUGGUGUUUUGACAUGAAC^     GAA-  AAGU  A   C  C          UACAU 
     110       100        90         80        70        60

Deep sequencing

3' NTU

Unknown

Motifs

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Mature sequence

Mml-Mir-506-P9_5p (predicted)

mirBase accession

MIMAT0006527

Sequence

0- UACUCAAAAAGCUGUCAGUCAC -22

Get sequence

Proposed targets

TargetScanVert: mml-miR-888

Star sequence

Mml-Mir-506-P9_3p* (predicted)

mirBase accession

None

Sequence

35- GACUGACACCUCUUUAGAUGAA -57

Get sequence