MirGeneDB 2.1
MirGeneDB ID

Mml-Mir-34-P3c

Family name MIR-34 (all species)
Seed GGCAGUG
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-449a
Paralogues Mml-Mir-34-P1  Mml-Mir-34-P2a  Mml-Mir-34-P2b  Mml-Mir-34-P3b 
Orthologues Aae-Mir-34  Aca-Mir-34-P3c  Ami-Mir-34-P3c  Asu-Mir-34  Bge-Mir-34  Bta-Mir-34-P3c  Cbr-Mir-34  Cel-Mir-34  Cfa-Mir-34-P3c  Cgi-Mir-34  Cin-Mir-34  Cli-Mir-34-P3c  Cmi-Mir-34-P3c  Cpi-Mir-34-P3c  Cpo-Mir-34-P3c  Cte-Mir-34  Dan-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dno-Mir-34-P3c  Dpu-Mir-34  Dsi-Mir-34  Dya-Mir-34  Efe-Mir-34  Esc-Mir-34  Ete-Mir-34-P3c  Gga-Mir-34-P3c  Gja-Mir-34-P3c  Gmo-Mir-34-P3c  Hsa-Mir-34-P3c  Isc-Mir-34  Lgi-Mir-34  Loc-Mir-34-P3c  Mal-Mir-34-P3c  Mdo-Mir-34-P3c  Mmu-Mir-34-P3c  Npo-Mir-34  Oan-Mir-34-P3c  Obi-Mir-34  Ocu-Mir-34-P3c  Ovu-Mir-34  Pbv-Mir-34-P3c  Pfl-Mir-34  Pma-Mir-34-P3  Pmi-Mir-34  Rno-Mir-34-P3c  Sha-Mir-34-P3c  Sko-Mir-34  Spt-Mir-34-P3c  Spu-Mir-34  Sto-Mir-34-P3c  Tca-Mir-34  Tgu-Mir-34-P3c  Tni-Mir-34-P3c  Xbo-Mir-34  Xla-Mir-34-P3c1  Xla-Mir-34-P3c2  Xtr-Mir-34-P3c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(rheMac8_trace)		 chr6: 56077684-56077745 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-34-P3c)		 Mir-34-P3c chr6: 56077684-56077745 [-] UCSC Ensembl
Mir-34-P3b chr6: 56077806-56077865 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGUGCUCUGGCUACCUGUGUGUGAUGAGCUGGCAGUGUAUUGUUAGCUGGUUGAAUAUGUGAAUGGCAUCAGCUAACAUGCAACUGCUGUCUUAUUGCAUAUACAAUGAAAAUCAGAGUGU
Get precursor sequence
Structure
        10          20        30         40        50        60
AAGUGCUCUGGCUACCU--     UG     C      -|    U          UGAAUAU 
                   GUGUG  AUGAG UGGCAG UGUAU GUUAGCUGGU       G
                   UAUAC  UAUUC GUCGUC ACGUA CAAUCGACUA       U
UGUGAGACUAAAAGUAACA     GU     U      A^    -          CGGUAAG 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-34-P3c_5p
mirBase accessionMIMAT0006330
Sequence 
0- UGGCAGUGUAUUGUUAGCUGGU -22
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Proposed targets TargetScanVert: mml-miR-449a-5p
Star sequence

Mml-Mir-34-P3c_3p*
mirBase accessionMIMAT0026876
Sequence 
40- CAGCUAACAUGCAACUGCUGUC -62
Get sequence
Proposed targets TargetScanVert: mml-miR-449a-3p