| MirGeneDB ID | Mal-Mir-728-P2 |
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| Family name |
MIR-728 (all species) |
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| Seed |
UACUAAG |
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| Species |
Asian swamp eel (Monopterus albus) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Gmo-Mir-728-P2
Loc-Mir-728
Tni-Mir-728-P2
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| Node of Origin (locus) |
Clupeocephala
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| Node of Origin (family) |
Neopterygii
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Genome context
(GCA_001952655.1_M_albus_1.0_genomic) |
KV885007.1: 631676-631737 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUGCAGAAUCAUAUUUUGCACCUCAUGAGAAAAUGUAGUAGACUAUAAGUAUACAUAAAACUCAGAAAGUAUACUAAGUAUACUACGUUUACUCAAGAGAGGCAUCUUCAGAGUUCCCAUUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GUGCAGAAUCAUAUUUU--| AC A A G AUA AUAAAA
GC CUC UGAG AAAUGUAGUA ACU AGUAUAC C
CG GAG ACUC UUUGCAUCAU UGA UCAUAUG U
AUUACCCUUGAGACUUCUA^ GA A A A A-- AAAGAC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
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| Star sequence |
Mal-Mir-728-P2_5p* |
| mirBase accession | None |
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| Sequence |
0- AAAUGUAGUAGACUAUAAGUAUAC -24
Get sequence
|
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| Mature sequence |
Mal-Mir-728-P2_3p |
| mirBase accession | None |
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| Sequence |
40- AUACUAAGUAUACUACGUUUAC -62
Get sequence
|
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