| MirGeneDB ID | Mal-Mir-722-P1-v1 |
| Family name |
MIR-722 (all species) |
| Seed |
UUUGCAG |
| Species |
Asian swamp eel (Monopterus albus) |
| MiRBase ID |
|
| Paralogues |
Mal-Mir-722-P1-v2
Mal-Mir-722-P2-v1
Mal-Mir-722-P2-v2
|
| Orthologues |
Dre-Mir-722-P1-v1
Dre-Mir-722-P1-v2
Gmo-Mir-722-P1-v1
Gmo-Mir-722-P1-v2
Lch-Mir-722
Tni-Mir-722-P1-v1
Tni-Mir-722-P1-v2
|
| Node of Origin (locus) |
Clupeocephala
|
| Node of Origin (family) |
Osteichthyes
|
Genome context (GCA_001952655.1_M_albus_1.0_genomic) |
KV884793.1: 1265392-1265456 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUCCCACCAUGAGACUAGAACAGAAUGGAAUUUGAAACGUUUUAGCCAAAAAUGUUUUCAUGGUGAAGGAGUUUUUUGCAGAAACGUUUCAGAUUUCGUUUUGUUCUCCGGCUUCAACUAAAUUU
Get precursor sequence
|
| Structure | 10 20 30 40 50 60
UUCCCACCAUGAGACUA--| A C UGUUUUCAU
GAACAGAAUGGAAUUUGAAACGUUUU GC AAAAA \
CUUGUUUUGCUUUAGACUUUGCAAAG CG UUUUU G
UUUAAAUCAACUUCGGCCU^ A U GAGGAAGUG
120 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
| Star sequence |
Mal-Mir-722-P1-v1_5p* |
| mirBase accession | None |
| Sequence |
0- UUUGAAACGUUUUAGCCAAAAA -22
Get sequence
|
| Mature sequence |
Mal-Mir-722-P1-v1_3p |
| mirBase accession | None |
| Sequence |
43- UUUUGCAGAAACGUUUCAGAUU -65
Get sequence
|