| MirGeneDB ID | Dre-Mir-722-P1-v1 |
| Family name |
MIR-722 (all species) |
| Seed |
UUUGCAG |
| Species |
Zebrafish (Danio rerio) |
| MiRBase ID |
|
| Paralogues |
Dre-Mir-722-P1-v2
Dre-Mir-722-P2-v1
Dre-Mir-722-P2-v2
|
| Orthologues |
Gmo-Mir-722-P1-v1
Gmo-Mir-722-P1-v2
Lch-Mir-722
Mal-Mir-722-P1-v1
Mal-Mir-722-P1-v2
Tni-Mir-722-P1-v1
Tni-Mir-722-P1-v2
|
| Node of Origin (locus) |
Clupeocephala
|
| Node of Origin (family) |
Osteichthyes
|
Genome context (danRer11) |
chr3: 49815209-49815273 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AACCUGCCCACAGACUGGAACAGAAUGGAAUUUGAAACGUUUUAGCCAAAAAUGUUUCCAUGGUAAAGGUGUUUUUUGCAGAAACGUUUCAGAUUUCGUUCUGUUCUCCAACUACGGGGAUGAAA
Get precursor sequence
|
| Structure | 10 20 30 40 50 60
AACCUGCCCACAGACUG--| A C UGUUUCCAU
GAACAGAAUGGAAUUUGAAACGUUUU GC AAAAA \
CUUGUCUUGCUUUAGACUUUGCAAAG CG UUUUU G
AAAGUAGGGGCAUCAACCU^ A U GUGGAAAUG
120 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
| Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
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| Star sequence |
Dre-Mir-722-P1-v1_5p* |
| mirBase accession | None |
| Sequence |
0- UUUGAAACGUUUUAGCCAAAAA -22
Get sequence
|
| Mature sequence |
Dre-Mir-722-P1-v1_3p |
| mirBase accession | None |
| Sequence |
43- UUUUGCAGAAACGUUUCAGAUU -65
Get sequence
|