MirGeneDB 2.1
MirGeneDB ID

Mal-Mir-193-P2b2

Family name MIR-193 (all species)
Seed AAUGCCC
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-193-P1b2 
Orthologues Aca-Mir-193-P2b  Ami-Mir-193-P2b  Bge-Mir-193-P2  Bta-Mir-193-P2b  Cbr-Mir-193-P2-v1  Cbr-Mir-193-P2-v2  Cel-Mir-193-P2-v1  Cel-Mir-193-P2-v2  Cfa-Mir-193-P2b  Cgi-Mir-193-P2  Cli-Mir-193-P2b  Cmi-Mir-193-P2b  Cpi-Mir-193-P2b  Cpo-Mir-193-P2b  Cte-Mir-193-P2  Dno-Mir-193-P2b  Dre-Mir-193-P2b2  Ebu-Mir-193-P2  Ete-Mir-193-P2b  Gga-Mir-193-P2b  Gja-Mir-193-P2b  Gmo-Mir-193-P2b2  Hme-Mir-193-P2  Hsa-Mir-193-P2b  Lch-Mir-193-P2b  Lgi-Mir-193-P2  Loc-Mir-193-P2b  Mml-Mir-193-P2b  Mmu-Mir-193-P2b  Mun-Mir-193-P2b  Oan-Mir-193-P2b  Ocu-Mir-193-P2b  Pbv-Mir-193-P2b  Pfl-Mir-193-P2  Pma-Mir-193-P2  Pmi-Mir-193-P2  Rno-Mir-193-P2b  Sha-Mir-193-P2b  Sko-Mir-193-P2  Spt-Mir-193-P2b  Spu-Mir-193-P2  Sto-Mir-193-P2b  Tca-Mir-193-P2  Tgu-Mir-193-P2b  Tni-Mir-193-P2b2  Xbo-Mir-193-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884720.1: 402380-402441 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAGAGAAAGAAAAGGCAGCAAGAAAAGUGAGGGACUUUUAGGGGCAGCUGUGUUUUAUUAACCCAGUCAUAAUGCCCCUAAAAAUCCUUAUUGCUCUUGCAAUGGUCAACAAAUCUCCAGU
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Structure
        10           20        30        40        50        60 
AAAGAGAAAGAAAAGGCA---|     AA        AC           GC    UUUUAUU 
                     GCAAGA  AGUGAGGG  UUUUAGGGGCA  UGUG       \
                     CGUUCU  UUAUUCCU  AAAAUCCCCGU  AUAC       A
UGACCUCUAAACAACUGGUAA^     CG        A-           A-    UGACCCA 
120       110       100        90         80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-193-P2b2_5p*
mirBase accessionNone
Sequence 
0- AGGGACUUUUAGGGGCAGCUGUG -23
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Mature sequence

Mal-Mir-193-P2b2_3p
mirBase accessionNone
Sequence 
40- UAAUGCCCCUAAAAAUCCUUAU -62
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