MirGeneDB 2.1
MirGeneDB ID

Hsa-Mir-489-v1

Family name MIR-489 (all species)
Seed UGACAUC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-489
Paralogues Hsa-Mir-489-v2 
Orthologues Aca-Mir-489-v1  Ami-Mir-489-v1  Bta-Mir-489-v1  Cfa-Mir-489  Cli-Mir-489-v1  Cpi-Mir-489-v1  Dno-Mir-489  Dre-Mir-489-v1  Gga-Mir-489-v1  Gja-Mir-489  Gmo-Mir-489-v1  Lch-Mir-489  Loc-Mir-489-v1  Mal-Mir-489-v1  Mml-Mir-489-v1  Mmu-Mir-489  Mun-Mir-489  Ocu-Mir-489  Pbv-Mir-489  Rno-Mir-489  Sha-Mir-489  Spt-Mir-489  Tgu-Mir-489-v1  Tni-Mir-489-v1  Xtr-Mir-489-v1 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(hg38)		 chr7: 93483947-93484006 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-489-v1)		 Mir-653 chr7: 93482784-93482840 [-] UCSC Ensembl
Mir-489-v2 chr7: 93483946-93484007 [-] UCSC Ensembl
Mir-489-v1 chr7: 93483947-93484006 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGACUACUGCUGUUGGUGGCAGCUUGGUGGUCGUAUGUGUGACGCCAUUUACUUGAACCUUUAGGAGUGACAUCACAUAUACGGCAGCUAAACUGCUACAUGGGACAACAAUUAAGAG
Get precursor sequence
Structure
        10          20        30        40        50         
GCUGACUACUGCUGUUG--|      C     G             CGC     ACUUGA 
                   GUGGCAG UUGGU GUCGUAUGUGUGA   CAUUU      A
                   CAUCGUC AAUCG CGGCAUAUACACU   GUGAG      C
GAGAAUUAACAACAGGGUA^      A     A             ACA     GAUUUC 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ar Bl Bo Bo Bo Bo Bo Br Br Br Br Br Br Br Br Br Br Br Es Ga He He He He He Ki Li Lu Ly Mu Ne Pa Pl Pl Sk Sp Sp St Su Te Th To Tr Ve
Star sequence

Hsa-Mir-489-v1_5p*
mirBase accessionMIMAT0026605
Sequence 
0- GGUCGUAUGUGUGACGCCAUUU -22
Get sequence
Proposed targets TargetScanVert: hsa-miR-489-5p
miRDB: MIMAT0026605
Mature sequence

Hsa-Mir-489-v1_3p
mirBase accessionMIMAT0002805
Sequence 
38- GUGACAUCACAUAUACGGCAGC -60
Get sequence
Proposed targets microrna.org: MIMAT0002805
TargetScanVert: hsa-miR-489-3p
miRDB: MIMAT0002805