Mir-153-P1

MirGeneDB ID

Hsa-Mir-153-P1

Family name

MIR-153 (all species)

Seed

UGCAUAG

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-153-2

Paralogues

Hsa-Mir-153-P2

Orthologues

Aca-Mir-153-P1 Ami-Mir-153-P1 Asu-Mir-153 Bfl-Mir-153 Bla-Mir-153 Bpl-Mir-153 Bta-Mir-153-P1 Cfa-Mir-153-P1 Cgi-Mir-153 Cin-Mir-153 Cli-Mir-153-P1 Cmi-Mir-153-P1 Cpi-Mir-153-P1 Cpo-Mir-153-P1 Cte-Mir-153 Dma-Mir-153 Dno-Mir-153-P1 Dpu-Mir-153 Dre-Mir-153-P1a Ete-Mir-153-P1 Gga-Mir-153-P1 Gja-Mir-153-P1 Gmo-Mir-153-P1a Gmo-Mir-153-P1b Isc-Mir-153 Lan-Mir-153 Lch-Mir-153-P1 Lgi-Mir-153 Loc-Mir-153-P1 Mal-Mir-153-P1a Mal-Mir-153-P1b Mdo-Mir-153-P1 Mml-Mir-153-P1 Mmu-Mir-153-P1 Mun-Mir-153-P1 Npo-Mir-153 Oan-Mir-153-P1 Obi-Mir-153 Ocu-Mir-153-P1 Ovu-Mir-153 Pbv-Mir-153-P1 Pfl-Mir-153 Pma-Mir-153-o1 Pmi-Mir-153 Rno-Mir-153-P1 Sha-Mir-153-P1 Sko-Mir-153 Sme-Mir-153 Spt-Mir-153-P1 Spu-Mir-153 Sto-Mir-153-P1 Tgu-Mir-153-P1 Tni-Mir-153-P1b Xbo-Mir-153 Xla-Mir-153-P1c Xla-Mir-153-P1d Xtr-Mir-153-P1

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(hg38)

chr7: 157574349-157574409 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UACCUUGCCAGCUAAUUAGCGGUGGCCAGUGUCAUUUUUGUGAUGUUGCAGCUAGUAAUAUGAGCCCAGUUGCAUAGUCACAAAAGUGAUCAUUGGAAACUGUGACUGUACUGCAGGGGCG

Get precursor sequence

Structure

        10        20        30         40        50        60
UACCUUGCCAGCUAAUUA     GG      -|            GU       AGUAAU 
                  GCGGU  CCAGUG UCAUUUUUGUGAU  UGCAGCU      A
                  UGUCA  GGUUAC AGUGAAAACACUG  ACGUUGA      U
GCGGGGACGUCAUGUCAG     AA      U^            AU       CCCGAG 
 .       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Star sequence

Hsa-Mir-153-P1_5p*

mirBase accession

MIMAT0026480

Sequence

0- GUCAUUUUUGUGAUGUUGCAGCU -23

Get sequence

Proposed targets

TargetScanVert: hsa-miR-153-5p
miRDB: MIMAT0026480

Mature sequence

Hsa-Mir-153-P1_3p

mirBase accession

MIMAT0000439

Sequence

39- UUGCAUAGUCACAAAAGUGAUC -61

Get sequence

Proposed targets

microrna.org: MIMAT0000439
TargetScanVert: hsa-miR-153-3p
miRDB: MIMAT0000439