Mir-148-P1

MirGeneDB ID

Hsa-Mir-148-P1

Family name

MIR-148 (all species)

Seed

CAGUGCA

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-148a

Paralogues

Hsa-Mir-148-P3 Hsa-Mir-148-P4

Orthologues

Aca-Mir-148-P1 Bta-Mir-148-P1 Cfa-Mir-148-P1 Cli-Mir-148-P1 Cli-Mir-148-P1-as Cmi-Mir-148-P1 Cpi-Mir-148-P1 Cpo-Mir-148-P1 Dno-Mir-148-P1 Ebu-Mir-148 Ete-Mir-148-P1 Gga-Mir-148-P1 Gja-Mir-148-P1 Lch-Mir-148-P1 Loc-Mir-148-P1 Mdo-Mir-148-P1 Mml-Mir-148-P1 Mmu-Mir-148-P1 Mun-Mir-148-P1 Oan-Mir-148-P1 Ocu-Mir-148-P1 Pbv-Mir-148-P1 Pma-Mir-148-o1 Rno-Mir-148-P1 Spt-Mir-148-P1 Sto-Mir-148-P1 Tgu-Mir-148-P1 Tgu-Mir-148-P1-as Xla-Mir-148-P1a Xla-Mir-148-P1b Xtr-Mir-148-P1

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr7: 25949922-25949981 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AGGAAGACAGCACGUUUGGUCUUUUGAGGCAAAGUUCUGAGACACUCCGACUCUGAGUAUGAUAGAAGUCAGUGCACUACAGAACUUUGUCUCUAGAGGCUGUGGUCGCCGAUGCCGCCA

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Structure

        10          20        30         40         50         
AGGAAGACAGCACGUUU--       U              -  A-|   CC    CUGAGU 
                   GGUCUUU GAGGCAAAGUUCUG AG  CACU  GACU      A
                   UCGGAGA CUCUGUUUCAAGAC UC  GUGA  CUGA      U
ACCGCCGUAGCCGCUGGUG       U              A  AC^   --    AGAUAG 
.       110       100        90        80          70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Star sequence

Hsa-Mir-148-P1_5p*

mirBase accession

MIMAT0004549

Sequence

0- AAAGUUCUGAGACACUCCGACU -22

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Proposed targets

microrna.org: MIMAT0004549
TargetScanVert: hsa-miR-148a-5p
TargetMiner: hsa-miR-148a-5p
miRDB: MIMAT0004549

Mature sequence

Hsa-Mir-148-P1_3p

mirBase accession

MIMAT0000243

Sequence

38- UCAGUGCACUACAGAACUUUGU -60

Get sequence

Proposed targets

microrna.org: MIMAT0000243
TargetScanVert: hsa-miR-148a-3p
TargetMiner: hsa-miR-148a-3p
miRDB: MIMAT0000243