| MirGeneDB ID | Ete-Mir-433 |
| Family name |
MIR-433 (all species) |
| Seed |
UCAUGAU |
| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Bta-Mir-433
Cfa-Mir-433
Cpo-Mir-433
Dno-Mir-433
Hsa-Mir-433
Mml-Mir-433
Mmu-Mir-433
Ocu-Mir-433
Rno-Mir-433
|
| Node of Origin (locus) |
Eutheria
|
| Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980297: 82399996-82400069 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
GAAGAAGAAGACCCAGUGGCCGGGGAGAAGUACGGUGAGCCUGUCAUUAUUCAGAGAGGCUAGAUCCUCUGUGUCGAGAAGGAUCAUGAUGGGCUCCUCGGUGUUCUCCAGGUAGCGGCUCCACACCAUGAAGG
Get precursor sequence
|
| Structure | 10 20 30 40 50 60
GAAGAAGAAGACCCAGUG---| GG GUA U U AGAGAGGCUAGAU
GCC GGAGAA CGG GAGCCUGUCAU AUUC C
UGG CCUCUU GCU CUCGGGUAGUA UAGG C
GGAAGUACCACACCUCGGCGA^ A- GUG C C AAGAGCUGUGUCU
130 120 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
| Star sequence |
Ete-Mir-433_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UACGGUGAGCCUGUCAUUAUUC -22
Get sequence
|
| Mature sequence |
Ete-Mir-433_3p |
| mirBase accession | None |
| Sequence |
52- AUCAUGAUGGGCUCCUCGGUGU -74
Get sequence
|