| MirGeneDB ID | Ete-Mir-345 |
|---|
| Family name |
MIR-345 (all species) |
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| Seed |
CUGACUC |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-345
Cfa-Mir-345
Cpo-Mir-345
Dno-Mir-345
Hsa-Mir-345
Mml-Mir-345
Mmu-Mir-345
Rno-Mir-345
|
|---|
| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(echTel2) |
JH980297: 83101738-83101795 [-]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
GUGAUGACCACGGGAACCAGGCCCAGGCCUGCUGACUCCUAGUCCAGUGCUCGUGAUGGGCAUAGGGCCCUGAACUAGGGGUCUGGAGGUCUGCGCUUGAAUAUCGACAAGUUCUUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUGAUGACCACGGGAAC--| C G - C U CGUGAU
CAGGC CAGGCCU CU GACUCCUAGU CAG GCU G
GUUCG GUCUGGA GG CUGGGGAUCA GUC CGG G
UUUUCUUGAACAGCUAUAA^ C - U A C GAUACG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Ete-Mir-345_5p |
| mirBase accession | None |
|---|
| Sequence |
0- GCUGACUCCUAGUCCAGUGCU -21
Get sequence
|
|---|
| Star sequence |
Ete-Mir-345_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- CCCUGAACUAGGGGUCUGGAG -58
Get sequence
|
|---|
