| MirGeneDB ID | Ete-Mir-224 |
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| Family name |
MIR-224 (all species) |
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| Seed |
AAGUCAC |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-224
Cfa-Mir-224
Cpo-Mir-224
Hsa-Mir-224
Mml-Mir-224
Mmu-Mir-224
Ocu-Mir-224
Rno-Mir-224
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(echTel2) |
JH980398: 3995184-3995252 [-]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
GCAGCAGAGGAGACAAGGCCCAGGGGCUUUCAAGUCACUAGUGGUUCCGUUUAGUAGAUGGUUGUGCAUUGUUUCAAAAUGGUGCCCUAGUGACUACAAAGCCCCAGAGCCGGCAUCAUCCCCCAAGCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCAGCAGAGGAGACAAG--| CCA CA U U AGUAGAUGGUU
GC GGGGCUUU AGUCACUAG GGU CCGUUU G
CG CCCCGAAA UCAGUGAUC CCG GGUAAA U
CCGAACCCCCUACUACGGC^ AGA CA - U ACUUUGUUACG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Ete-Mir-224_5p |
| mirBase accession | None |
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| Sequence |
0- CAAGUCACUAGUGGUUCCGUUUAG -24
Get sequence
|
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| Star sequence |
Ete-Mir-224_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
46- AAAUGGUGCCCUAGUGACUACAA -69
Get sequence
|
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