| MirGeneDB ID | Ete-Mir-185 |
|---|
| Family name |
MIR-185 (all species) |
|---|
| Seed |
GGAGAGA |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-185
Cfa-Mir-185
Cpo-Mir-185
Dno-Mir-185
Hsa-Mir-185
Mml-Mir-185
Mmu-Mir-185
Ocu-Mir-185
Rno-Mir-185
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
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Genome context
(echTel2) |
JH980301: 71891276-71891331 [-]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
CAGGCCUGGCUUGAGUGGGGGGUGAGGGGCUGGAGAGAAAGGCAGUCCCUGAUGGUCCCCUCCCCAGGGGCUGGUUUUCCUCUGGUCCUUCCUUCCCAAUGACCGCGUCUUUGUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAGGCCUGGCUUGAGUG--| U UG A G AUGGUC
GGGGG GAGGGGC GAG GAAAG CAGUCCCUG \
CCCUU CUUCCUG CUC CUUUU GUCGGGGAC C
ACUGUUUCUGCGCCAGUAA^ C GU - G CCCUCC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Ete-Mir-185_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UGGAGAGAAAGGCAGUCCCUGA -22
Get sequence
|
|---|
| Star sequence |
Ete-Mir-185_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
35- AGGGGCUGGUUUUCCUCUGGU -56
Get sequence
|
|---|
