MirGeneDB 2.1
MirGeneDB ID

Ete-Mir-154-P28

Family name MIR-154 (all species)
Seed GAGGAUA
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3a-v1  Ete-Mir-154-P3a-v2  Ete-Mir-154-P4a  Ete-Mir-154-P4b  Ete-Mir-154-P5  Ete-Mir-154-P6  Ete-Mir-154-P7  Ete-Mir-154-P8  Ete-Mir-154-P9  Ete-Mir-154-P10  Ete-Mir-154-P12  Ete-Mir-154-P13  Ete-Mir-154-P14  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20-v1  Ete-Mir-154-P20-v2  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P24  Ete-Mir-154-P25  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P36 
Orthologues Bta-Mir-154-P28  Cfa-Mir-154-P28  Cpo-Mir-154-P28  Dno-Mir-154-P28c  Dno-Mir-154-P28d  Hsa-Mir-154-P28a  Hsa-Mir-154-P28b  Mml-Mir-154-P28a  Mml-Mir-154-P28b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82297259-82297317 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CUCACCGAGGCUGCCCUUUGGUACUUGAAGAGAGGAUACCCUUGUAUGUUCACUCCAUUCAUGACGAAUAUACAGGGGGAGACUCUUAUUUGCGUAUCAAACUCUGUCUGGGAAGGCGC
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Structure
        10          20         30        40        50        
CUCACCGAGGCUGCCCU--       U    -|    GAUA             ACUCCA 
                   UUGGUAC UGAA GAGAG    CCCUUGUAUGUUC      U
                   AACUAUG GUUU UUCUC    GGGGACAUAUAAG      U
CGCGGAAGGGUCUGUCUCA       C    A^    AGAG             CAGUAC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Ete-Mir-154-P28_5p
mirBase accessionNone
Sequence 
0- AGAGGAUACCCUUGUAUGUUCA -22
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Co-mature sequence

Ete-Mir-154-P28_3p
mirBase accessionNone
Sequence 
36- AAUAUACAGGGGGAGACUCUUAU -59
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