| MirGeneDB ID | Ete-Mir-149 |
|---|
| Family name |
MIR-149 (all species) |
|---|
| Seed |
CUGGCUC |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bta-Mir-149
Cfa-Mir-149
Cpo-Mir-149
Dno-Mir-149
Hsa-Mir-149
Mml-Mir-149
Mmu-Mir-149
Ocu-Mir-149
Rno-Mir-149
|
|---|
| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(echTel2) |
JH980302: 64016398-64016459 [+]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
GCCUCCAGGGUCUCAGGCCGGCGCCCAGGCUCUGGCUCCGUGUCUUCACUCCCGUAACCAUCUGAGGAGGGAGGGAGGGACGGGGGCUGUGCUGGGGCGGCUGGAACAGCACAGGCCACUGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCCUCCAGGGUCUCAGG- -| A UCU - G A GUAACCA
CCGG CGCCC GGC GGCUCC GU UCUUC CUCCC \
GGUC GCGGG UCG UCGGGG CA GGAGG GAGGG U
GGUCACCGGACACGACAA G^ G UG- G G - AGGAGUC
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Ete-Mir-149_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCUGGCUCCGUGUCUUCACUCCC -23
Get sequence
|
|---|
| Star sequence |
Ete-Mir-149_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
40- GAGGGAGGGACGGGGGCUGUGC -62
Get sequence
|
|---|
