| MirGeneDB ID | Dya-Mir-959-v1 |
|---|
| Family name |
MIR-959 (all species) |
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| Seed |
UGUCAUC |
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| Species |
Fruit fly (Drosophila yakuba) |
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| MiRBase ID |
|
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| Paralogues |
Dya-Mir-959-v2
|
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| Orthologues |
Dan-Mir-959-v1
Dme-Mir-959-v1
Dsi-Mir-959-v1
|
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| Node of Origin (locus) |
D. melanogaster group
|
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| Node of Origin (family) |
D. melanogaster group
|
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Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel) |
2L: 13552286-13552348 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUUAAAUUGAUUUUAACUUUGUUCUAUAUUCUUAGUACUCGGGUUGACAAAGACCUUUCCUUGCGGCGCCUUUGUCAUCGGGGGUAUUAUGAAAUAUAGCUCAAAGAAACUGCAAGGAUCAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GUUAAAUUGAUUUUAAC- UU -| U GGGU GACCUUUCC
UUUG CUAUA UUC UAGUACUC UGACAAA \
AAAC GAUAU AAG AUUAUGGG ACUGUUU U
CUACUAGGAACGUCAAAG UC A^ U GGCU CCGCGGCGU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Dya-Mir-959-v1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CUUAGUACUCGGGUUGACAAA -21
Get sequence
|
|---|
| Mature sequence |
Dya-Mir-959-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
41- UUGUCAUCGGGGGUAUUAUGAA -63
Get sequence
|
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