MirGeneDB 2.1
MirGeneDB ID

Dre-Mir-30-P1d

Family name MIR-30 (all species)
Seed GUAAACA
Species Zebrafish (Danio rerio)
MiRBase ID
Paralogues Dre-Mir-30-P1a  Dre-Mir-30-P1b  Dre-Mir-30-P1o1  Dre-Mir-30-P2a  Dre-Mir-30-P2b  Dre-Mir-30-P2d 
Orthologues Aca-Mir-30-P1d  Ami-Mir-30-P1d  Bta-Mir-30-P1d  Cfa-Mir-30-P1d  Cli-Mir-30-P1d  Cmi-Mir-30-P1d3  Cmi-Mir-30-P1d4  Cpi-Mir-30-P1d  Cpo-Mir-30-P1d  Dno-Mir-30-P1d  Ete-Mir-30-P1d  Gga-Mir-30-P1d  Gja-Mir-30-P1d  Gmo-Mir-30-P1d  Hsa-Mir-30-P1d  Lch-Mir-30-P1d  Loc-Mir-30-P1d  Mal-Mir-30-P1d  Mdo-Mir-30-P1d  Mml-Mir-30-P1d  Mmu-Mir-30-P1d  Mun-Mir-30-P1d  Oan-Mir-30-P1d  Ocu-Mir-30-P1d  Pbv-Mir-30-P1d  Rno-Mir-30-P1d  Sha-Mir-30-P1d  Spt-Mir-30-P1d  Sto-Mir-30-P1d3  Sto-Mir-30-P1d4  Tgu-Mir-30-P1d  Tni-Mir-30-P1d  Xla-Mir-30-P1d1  Xla-Mir-30-P1d2  Xtr-Mir-30-P1d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr19: 42099800-42099865 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGUGUCGUUUCUGGCAGCUUGGGGGCGCUGUAAACAUCCUUGACUGGAAGCUGGGUGUAGGGUUUGUGAAGGCUUUCAGUCGGAUGUUUGCAGCACUCUGCUUCCCUUAACUCUGCACAACCAG
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Structure
        10             20        30        40        50        60   
GCUGUGUCGUUUCUGGC-----|  UUG    C             UU           GGGUGUAG 
                      AGC   GGGG GCUGUAAACAUCC  GACUGGAAGCU        G
                      UCG   UCUC CGACGUUUGUAGG  CUGACUUUCGG        G
GACCAACACGUCUCAAUUCCCU^  ---    A             --           AAGUGUUU 
    120       110          100        90          80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-30-P1d_5p
mirBase accessionNone
Sequence 
0- UGUAAACAUCCUUGACUGGAAGCU -24
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Star sequence

Dre-Mir-30-P1d_3p*
mirBase accessionNone
Sequence 
44- CUUUCAGUCGGAUGUUUGCAGC -66
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