| MirGeneDB ID | Dan-Mir-959-v2 |
|---|
| Family name |
MIR-959 (all species) |
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| Seed |
UAGUACU |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
Dan-Mir-959-v1
|
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| Orthologues |
Dme-Mir-959-v2
Dsi-Mir-959-v2
Dya-Mir-959-v2
|
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| Node of Origin (locus) |
D. melanogaster group
|
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| Node of Origin (family) |
D. melanogaster group
|
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Genome context
(Dana_caf1) |
scaffold_12916: 11084736-11084796 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UUAAAUUUAUUUCAAUUUUGUUCUAUAUUCUUAGUACUCGGGUUGAUAAAGACCUUUCCUGGAGCCGCCUUUGUCAUCGGGGGUAUUAUGAAAUAUAGCUCAAAAAACCAGCACAAUGUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUAAAUUUAUUUCAAUU- UU -| U GGGU ACCUUUCC
UUG CUAUA UUC UAGUACUC UGAUAAAG \
AAC GAUAU AAG AUUAUGGG ACUGUUUC U
UAUGUAACACGACCAAAA UC A^ U GGCU CGCCGAGG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dan-Mir-959-v2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUAGUACUCGGGUUGAUAAAGA -22
Get sequence
|
|---|
| Star sequence |
Dan-Mir-959-v2_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- UUUGUCAUCGGGGGUAUUAUGA -61
Get sequence
|
|---|
