MirGeneDB 2.1
MirGeneDB ID

Cte-Mir-87-P1

Family name MIR-87 (all species)
Seed UGAGCAA
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-87b
Paralogues Cte-Mir-87-P2 
Orthologues Bge-Mir-87-P1  Cbr-Mir-87-o1  Cel-Mir-87-o1  Cgi-Mir-87-P1  Csc-Mir-87-P1k1  Csc-Mir-87-P1k2  Csc-Mir-87-P1l  Isc-Mir-87-P1  Lan-Mir-87-P1  Lgi-Mir-87-P1  Lpo-Mir-87-P1c  Lpo-Mir-87-P1d  Lpo-Mir-87-P1e  Lpo-Mir-87-P1f  Lpo-Mir-87-P1g  Lpo-Mir-87-P1h  Lpo-Mir-87-P1i  Lpo-Mir-87-P1j  Tca-Mir-87-P1 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_222: 219605-219665 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P1)		 Mir-87-P2 CAPTEscaffold_222: 219067-219151 [-] Ensembl
Mir-87-P1 CAPTEscaffold_222: 219605-219665 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUAACGGUGGAGUGGAAUGUCGCGUGGUGGCGCCUGACACUUUGACUCAAACCUCUUUUCGUGAGUAGGUGAGCAAAGUUUCAGGUGUAUCUGCGCGACUGCAUUAUCAACUGCCUUAUC
Get precursor sequence
Structure
        10          20        30        40        50        60 
UUUAACGGUGGAGUGGAAU--|     UG UG        C      A   AA    CUUUU 
                     GUCGCG  G  GCGCCUGA ACUUUG CUC  ACCU     C
                     CAGCGC  C  UGUGGACU UGAAAC GAG  UGGA     G
CUAUUCCGUCAACUAUUACGU^     GU UA        U      -   --    UGAGU 
 .       110       100        90        80           70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cte-Mir-87-P1_5p*
mirBase accessionNone
Sequence 
0- GCGCCUGACACUUUGACUCAAACCU -25
Get sequence
Mature sequence

Cte-Mir-87-P1_3p
mirBase accessionMIMAT0009519
Sequence 
39- GUGAGCAAAGUUUCAGGUGUAU -61
Get sequence