MirGeneDB 2.1
MirGeneDB ID

Cte-Mir-2685-P1

Family name MIR-2685 (all species)
Seed AACUCAG
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-2688
Paralogues Cte-Mir-2685-P2 
Orthologues Efe-Mir-2685-P1a  Efe-Mir-2685-P1b 
Node of Origin (locus) Annelida
Node of Origin (family) Annelida
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_777: 8901-8958 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2685-P1)		 Mir-2685-P2 CAPTEscaffold_777: 8763-8827 [-] Ensembl
Mir-2685-P1 CAPTEscaffold_777: 8901-8958 [-] Ensembl
Mir-281 CAPTEscaffold_777: 24457-24511 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCGUGUUAUAUUAUUAUCGGAGUCAGGAUGGCGCUGGUUUUACUGAAGUUGUGGCCAACAAACCUCAUAACUCAGUCAGACCACGCCAUACUGCUCACUUCAAACUGCAUCUAUGUAU
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Structure
        10           20        30        40        50         
UCGUGUUAUAUUAUUAUCG---|  U   G      C      U     A      GCCAA 
                      GAG CAG AUGGCG UGGUUU ACUGA GUUGUG     C
                      CUC GUC UACCGC ACCAGA UGACU CAAUAC     A
UAUGUAUCUACGUCAAACUUCA^  -   A      -      C     -      UCCAA 
      110       100         90         80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cte-Mir-2685-P1_5p*
mirBase accessionMIMAT0013540
Sequence 
0- GCGCUGGUUUUACUGAAGUUGUG -23
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Mature sequence

Cte-Mir-2685-P1_3p
mirBase accessionMIMAT0013541
Sequence 
37- UAACUCAGUCAGACCACGCCA -58
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