MirGeneDB 2.1
MirGeneDB ID

Cte-Mir-2000

Family name MIR-2000 (all species)
Seed AAGUCUU
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-2000
Paralogues
Orthologues Efe-Mir-2000-P1  Efe-Mir-2000-P2 
Node of Origin (locus) Annelida
Node of Origin (family) Annelida
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_24: 172461-172517 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2000)		 Mir-2000 CAPTEscaffold_24: 172461-172517 [-] Ensembl
Mir-1998 CAPTEscaffold_24: 172651-172724 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUAACCAAUACUAAUCUUCGCAUUUCUUACCUGGAAGUUGGGAUGGCUUUUAUUUACAUCUUGUAAAAGUCUUCACUACUUUCAGUUCGGAGAUGUGUCUUAAUACUUAACACAGCU
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Structure
        10          20        30        40        50        
GUAACCAAUACUAAUCUU--|        UAC        UGG  U        UUUAC 
                    CGCAUUUCU   CUGGAAGU   GA GGCUUUUA     \
                    GUGUAGAGG   GACUUUCA   CU CUGAAAAU     A
UCGACACAAUUCAUAAUUCU^        CUU        UCA  U        GUUCU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Cte-Mir-2000_5p* (predicted)
mirBase accessionNone
Sequence 
0- CUGGAAGUUGGGAUGGCUUUUA -22
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Mature sequence

Cte-Mir-2000_3p
mirBase accessionMIMAT0009711
Sequence 
35- AAAGUCUUCACUACUUUCAGUU -57
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