MirGeneDB 2.1
MirGeneDB ID

Cpo-Mir-12082

Family name MIR-12082 (all species)
Seed AGCCAAC
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-12082
Paralogues
Orthologues
Node of Origin (locus) C. porcellus
Node of Origin (family) C. porcellus
Genome context
(cavPor3)		 scaffold_7: 45795923-45795982 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-12082)		 Mir-12082 scaffold_7: 45795923-45795982 [+] UCSC
Mir-138-P1 scaffold_7: 45796470-45796530 [+] UCSC
Precursor
(pre-Mir +30nt flank)
GAUCCCUGCCCAUGAUCCUAGGGGAUGGGGAAGCCAACCACAGACACCACAGAAAAGAUAAAUCUCUCUGAUGGUGUCUUAGUUGCUUUCCUGUUCCUGGGACGUGAUACCCUGACACCC
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Structure
        10          20        30        40         50          
GAUCCCUGCCCAUGAUC--| A              C   CAC        -    AAAGAU 
                   CU GGGGAUGGGGAAGC AAC   AGACACCA CAGA      \
                   GG UCCUUGUCCUUUCG UUG   UCUGUGGU GUCU      A
CCCACAGUCCCAUAGUGCA^ G              -   AU-        A    CUCUAA 
.       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Cpo-Mir-12082_5p
mirBase accessionMIMAT0047467
Sequence 
0- AAGCCAACCACAGACACCACAGA -23
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Star sequence

Cpo-Mir-12082_3p*
mirBase accessionMIMAT0047468
Sequence 
38- UGAUGGUGUCUUAGUUGCUUUC -60
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