| MirGeneDB ID | Cmi-Mir-19-P2b |
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| Family name |
MIR-19 (all species) |
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| Seed |
GUGCAAA |
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| Species |
Australian ghostshark (Callorhinchus milii) |
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| MiRBase ID |
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| Paralogues |
Cmi-Mir-19-P1a-v1
Cmi-Mir-19-P1a-v2
Cmi-Mir-19-P1c
Cmi-Mir-19-P2a
Cmi-Mir-19-P2c
Cmi-Mir-19-P2d
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| Orthologues |
Sto-Mir-19-P2b
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| Node of Origin (locus) |
Gnathostomata
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| Node of Origin (family) |
Vertebrata
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Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3) |
KI635855.1: 9358429-9358492 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUGAGAGGCAGGUGUAAGCUGACUCUGGUUAGUUUUGCUGGCUUUGCAGUCAGUUGCGUGAUGCUCAGUACUGUGCAAAUCCACGCAAAACUGACUGCGGCAGUGAUUGCAGCACAAGGUGAGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GUGAGAGGCAGGUGUAA---| A C - C GU UGCGUGA
GCUG CU UGGUUAGUUUUGC UGG UUUGCA CAGU \
UGAC GG GUCAGUCAAAACG ACC AAACGU GUCA U
GGAGUGGAACACGACGUUAG^ - C C U -- UGACUCG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bl |
Br |
Ey |
Gi |
Gl |
He |
In |
Ki |
Li |
Mu |
Ov |
Pa |
Sk |
Sp |
Te |
Ut |
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| Star sequence |
Cmi-Mir-19-P2b_5p* |
| mirBase accession | None |
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| Sequence |
0- AGUUUUGCUGGCUUUGCAGUCAGU -24
Get sequence
|
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| Mature sequence |
Cmi-Mir-19-P2b_3p |
| mirBase accession | None |
|---|
| Sequence |
41- UGUGCAAAUCCACGCAAAACUGA -64
Get sequence
|
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