MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-488

Family name MIR-488 (all species)
Seed UGAAAGG
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-488
Paralogues
Orthologues Bta-Mir-488  Dno-Mir-488  Ete-Mir-488  Hsa-Mir-488  Mml-Mir-488  Mmu-Mir-488  Ocu-Mir-488  Rno-Mir-488 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr7: 22597966-22598024 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCUAGAGUGAAUUUCCGAGAAUCAUCUCUCCCAGAUAAUGGCACUCUCAAACAAGUUUUCAAGUUGUUUGAAAGGCUAUUUCUUGGUCAGAAGACUCUCAAUUCCUUCUGGAAGCCUC
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Structure
        10          20        30        40        50          
GCCUAGAGUGAAUUUCC--|   A  A   CU  C   U      A  C      AAGUUU 
                   GAGA UC UCU  CC AGA AAUGGC CU UCAAAC      \
                   CUCU AG AGA  GG UCU UUAUCG GA AGUUUG      U
CUCCGAAGGUCUUCCUUAA^   C  A   CU  U   -      -  A      UUGAAC 
       110       100        90         80         70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-488_5p*
mirBase accessionMIMAT0009903
Sequence 
0- CCCAGAUAAUGGCACUCUCAAAC -23
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Proposed targets TargetScanVert: cfa-miR-488
miRDB: MIMAT0009903
Mature sequence

Cfa-Mir-488_3p
mirBase accessionNone
Sequence 
38- UUGAAAGGCUAUUUCUUGGUC -59
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