MirGeneDB 2.1
MirGeneDB ID

Cel-Mir-281-P4

Family name MIR-281 (all species)
Seed GUCAUGG
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-47
Paralogues Cel-Mir-281-P3 
Orthologues Aae-Mir-281  Asu-Mir-281  Bfl-Mir-281  Bge-Mir-281  Bla-Mir-281  Bpl-Mir-281  Cbr-Mir-281-P4  Cgi-Mir-281  Cin-Mir-281  Csc-Mir-281  Cte-Mir-281  Dma-Mir-281  Dpu-Mir-281  Ebu-Mir-281  Esc-Mir-281  Hme-Mir-281  Isc-Mir-281  Npo-Mir-281  Obi-Mir-281  Ovu-Mir-281  Pfl-Mir-281  Sko-Mir-281  Sme-Mir-281  Sto-Mir-281  Tca-Mir-281 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Bilateria
Genome context
(ce11)		 chrX: 13921268-13921331 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUUAGUUGAUCGAGAGCCGACUGAAACUGAAGAGAGCAGUCUAUUGACAGUCGGUUACUCGAAAUCUUUACUGUCAUGGAGGCGCUCUCUUCAGAUGAUGUCUGGCCCAUUUUUUAAUCAAUU
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Structure
        10          20        30        40         50        60 
GGUUAGUUGAUCGAGAG-  -|  UGAAA           A    AU-       CGGUUACU 
                  CC GAC     CUGAAGAGAGC GUCU   UGACAGU        C
                  GG CUG     GACUUCUCUCG CGGA   ACUGUCA        G
UUAACUAAUUUUUUACCC  U^  UAGUA           -    GGU       UUUCUAAA 
  120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Wt Da Ea Mi Yo Yo
Star sequence

Cel-Mir-281-P4_5p*
mirBase accessionMIMAT0015097
Sequence 
0- AAGAGAGCAGUCUAUUGACAGU -22
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Proposed targets microrna.org: MIMAT0015097
Mature sequence

Cel-Mir-281-P4_3p
mirBase accessionMIMAT0000018
Sequence 
42- UGUCAUGGAGGCGCUCUCUUCA -64
Get sequence
Proposed targets microrna.org: MIMAT0000018
TargetScanWorm: cel-miR-47