MirGeneDB 2.1
MirGeneDB ID

Cel-Mir-281-P3

Family name MIR-281 (all species)
Seed GUCAUGG
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-46
Paralogues Cel-Mir-281-P4 
Orthologues Aae-Mir-281  Asu-Mir-281  Bfl-Mir-281  Bge-Mir-281  Bla-Mir-281  Bpl-Mir-281  Cbr-Mir-281-P3  Cgi-Mir-281  Cin-Mir-281  Csc-Mir-281  Cte-Mir-281  Dma-Mir-281  Dpu-Mir-281  Ebu-Mir-281  Esc-Mir-281  Hme-Mir-281  Isc-Mir-281  Npo-Mir-281  Obi-Mir-281  Ovu-Mir-281  Pfl-Mir-281  Sko-Mir-281  Sme-Mir-281  Sto-Mir-281  Tca-Mir-281 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Bilateria
Genome context
(ce11)		 chrIII: 13660529-13660596 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUAAGGGUCCAAACUGCUGAGGUGAAGCUGAAGAGAGCCGUCUAUUGACAGUUCAAGACCACGAGUCGUUGUGUGCUGUCAUGGAGUCGCUCUCUUCAGAUGAUCCGGUCAAUGGUAUUUUGUUUUAA
Get precursor sequence
Structure
        10        20          30        40         50        60   
GUAAGGGUCCAAACUGCUGA--  UGAAG           CG-|    U      UCAAGACCAC 
                      GG     CUGAAGAGAGC   UCUAU GACAGU          G
                      CC     GACUUCUCUCG   AGGUA CUGUCG          A
AAUUUUGUUUUAUGGUAACUGG  UAGUA           CUG^    -      UGUGUUGCUG 
      120       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Wt Da Ea Mi Yo Yo
Star sequence

Cel-Mir-281-P3_5p*
mirBase accessionMIMAT0015096
Sequence 
0- AAGAGAGCCGUCUAUUGACAGU -22
Get sequence
Proposed targets microrna.org: MIMAT0015096
Mature sequence

Cel-Mir-281-P3_3p
mirBase accessionMIMAT0000017
Sequence 
46- UGUCAUGGAGUCGCUCUCUUCA -68
Get sequence
Proposed targets microrna.org: MIMAT0000017
TargetScanWorm: cel-miR-46