| MirGeneDB ID | Bge-Novel-9-P2 |
|---|
| Family name |
BGE-NOVEL-9 (all species) |
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| Seed |
ACGAUAA |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
Bge-Novel-9-P1
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ614500.1: 82175-82234 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACAUCGAUAUGGGGAAAGAGGUUCAUGCCAUACGAUAAUGUCUGUGGCUCAGAUUGGUGUAUAAAUUCUGACCGUGGACAAUAUGGUACUGAAUGAGCUUUAAUGGCACAAGUAUAAUCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACAUCGAUAUGGGGAAA--| GC - G A UG C UUGGUG
GAGGUUCAU CA UAC AUA UGUC UGG UCAGA \
UUUCGAGUA GU AUG UAU ACAG GCC AGUCU U
CCUAAUAUGAACACGGUAA^ A- C G A GU - UAAAUA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Mature sequence |
Bge-Novel-9-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UACGAUAAUGUCUGUGGCUCAGA -23
Get sequence
|
|---|
| Star sequence |
Bge-Novel-9-P2_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- UGACCGUGGACAAUAUGGUACU -60
Get sequence
|
|---|
