| MirGeneDB ID | Bge-Novel-9-P1 |
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| Family name |
BGE-NOVEL-9 (all species) |
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| Seed |
AUCUUAU |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
Bge-Novel-9-P2
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ614500.1: 80393-80452 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUUGAUAUGAGAGAAAGAAGGUUCAUGCCAUAUCUUAUUGUCUGGGGCUCAGAUUGGUGUAUAAAUUCUGACCGUGGCCAAUAUGAUACGGGGUGAGCUUCAAUAGCACAAGUAGACUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUUGAUAUGAGAGAAAGA--| G A U U G C UUGGUG
AGGUUCAU CC UAUC UAUUG CUG GG UCAGA \
UUCGAGUG GG AUAG AUAAC GGU CC AGUCU U
UAUCAGAUGAACACGAUAAC^ G C U C G - UAAAUA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Mature sequence |
Bge-Novel-9-P1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAUCUUAUUGUCUGGGGCUCAGA -23
Get sequence
|
|---|
| Star sequence |
Bge-Novel-9-P1_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- UGACCGUGGCCAAUAUGAUACG -60
Get sequence
|
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