MirGeneDB 2.1
MirGeneDB ID

Bge-Mir-279-o36

Family name MIR-279 (all species)
Seed GACUAGA
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-279-o35  Bge-Mir-279-o37  Bge-Mir-279-o38  Bge-Mir-279-o39 
Orthologues Bpl-Mir-279  Cgi-Mir-279  Esc-Mir-279  Isc-Mir-279  Lgi-Mir-279  Npo-Mir-279  Obi-Mir-279  Ovu-Mir-279 
Node of Origin (locus) B. germanica
Node of Origin (family) Protostomia
Genome context
(Bger_2.0)		 KZ614507.1: 1095704-1095765 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCCCGAAGAAUUCUCCAGCCGUUUGCUUCGGAUGGCUGUGUUUCUGGUGCAUGUGCAUUUGAAGAUCUCAUGACUAGAUCCACACUCAUCCAUAGCAGACGGUAUGAAUCACACAAACAACA
Get precursor sequence
Structure
        10          20        30        40        50        60 
GCCCGAAGAAUUCUCCA--|         UC     GC    UU      G    UGCAUUU 
                   GCCGUUUGCU  GGAUG  UGUG  UCUGGU CAUG       \
                   UGGCAGACGA  CCUAC  ACAC  AGAUCA GUAC       G
ACAACAAACACACUAAGUA^         UA     UC    CU      -    UCUAGAA 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Star sequence

Bge-Mir-279-o36_5p*
mirBase accessionNone
Sequence 
0- GAUGGCUGUGUUUCUGGUGCAUG -23
Get sequence
Mature sequence

Bge-Mir-279-o36_3p
mirBase accessionNone
Sequence 
40- UGACUAGAUCCACACUCAUCCA -62
Get sequence