MirGeneDB 2.1
MirGeneDB ID

Bge-Mir-2-P4d-v2

Family name MIR-2 (all species)
Seed CACAGCC
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-2-P1-v1  Bge-Mir-2-P1-v2  Bge-Mir-2-P2  Bge-Mir-2-P3  Bge-Mir-2-P4c-v1  Bge-Mir-2-P4c-v2  Bge-Mir-2-P4d-v1  Bge-Mir-2-P7 
Orthologues Aae-Mir-2-P4-v1  Aae-Mir-2-P4-v2  Cbr-Mir-2-o4  Cel-Mir-2-o4  Dma-Mir-2-P4  Dpu-Mir-2-P4  Hme-Mir-2-P4  Isc-Mir-2-P4  Tca-Mir-2-P4-v1  Tca-Mir-2-P4-v2 
Node of Origin (locus) B. germanica
Node of Origin (family) Protostomia
Genome context
(Bger_2.0)		 KZ615436.1: 350982-351043 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAUAGUUCGGAGAUUAUGAUCUCAUUGCCCUCGUCAGAGUGGUUAUGAUGUGUCUAUAUUAAUUUCAUAUCACAGCCAGCUUUGAUGAGCGCAAAGGGAUUCUAAACACCUUUUAAGAAAA
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Structure
        10          20        30        40         50          
UGAUAGUUCGGAGAUUAU--      A    C          -|    A     UGUCUAUA 
                    GAUCUC UUGC CUCGUCAGAG UGGUU UGAUG        \
                    UUAGGG AACG GAGUAGUUUC ACCGA ACUAU        U
AAAAGAAUUUUCCACAAAUC      A    C          G^    C     ACUUUAAU 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Star sequence

Bge-Mir-2-P4d-v2_5p*
mirBase accessionNone
Sequence 
0- CUCGUCAGAGUGGUUAUGAUG -21
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Mature sequence

Bge-Mir-2-P4d-v2_3p
mirBase accessionNone
Sequence 
40- UCACAGCCAGCUUUGAUGAGCG -62
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