MirGeneDB 2.1
MirGeneDB ID

Bge-Mir-2-P4c-v2

Family name MIR-2 (all species)
Seed CACAGCC
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-2-P1-v1  Bge-Mir-2-P1-v2  Bge-Mir-2-P2  Bge-Mir-2-P3  Bge-Mir-2-P4c-v1  Bge-Mir-2-P4d-v1  Bge-Mir-2-P4d-v2  Bge-Mir-2-P7 
Orthologues Aae-Mir-2-P4-v1  Aae-Mir-2-P4-v2  Cbr-Mir-2-o4  Cel-Mir-2-o4  Dma-Mir-2-P4  Dpu-Mir-2-P4  Hme-Mir-2-P4  Isc-Mir-2-P4  Tca-Mir-2-P4-v1  Tca-Mir-2-P4-v2 
Node of Origin (locus) B. germanica
Node of Origin (family) Protostomia
Genome context
(Bger_2.0)		 KZ615436.1: 353745-353804 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAAACCAAACAUAAACUGCUUGGUGUGCUGCUCACAAAGCUGUUGUGAUGUGUCGAUUUGAGUUCAUAUCACAGCCAGCUUUGAUGAGCGGCACACUAAGAUGAACUACAGAACUUCAAC
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Structure
        10          20        30         40         50        
GAAACCAAACAUAAACUG--                -       -|        UGUCGAU 
                    CUUGGUGUGCUGCUCA CAAAGCU GUUGUGAUG       U
                    GAAUCACACGGCGAGU GUUUCGA CGACACUAU       U
CAACUUCAAGACAUCAAGUA                A       C^        ACUUGAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Star sequence

Bge-Mir-2-P4c-v2_5p*
mirBase accessionNone
Sequence 
0- CUCACAAAGCUGUUGUGAUG -20
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Mature sequence

Bge-Mir-2-P4c-v2_3p
mirBase accessionNone
Sequence 
38- UCACAGCCAGCUUUGAUGAGCG -60
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