MirGeneDB 2.1
MirGeneDB ID

Aca-Mir-145

Family name MIR-145 (all species)
Seed UCCAGUU
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-145
Paralogues
Orthologues Ami-Mir-145  Bta-Mir-145  Cfa-Mir-145  Cli-Mir-145  Cmi-Mir-145  Cpi-Mir-145  Cpo-Mir-145  Dno-Mir-145  Dre-Mir-145  Ebu-Mir-145  Ete-Mir-145  Gga-Mir-145  Gja-Mir-145  Gmo-Mir-145  Hsa-Mir-145  Lch-Mir-145  Loc-Mir-145  Mal-Mir-145  Mdo-Mir-145  Mml-Mir-145  Mmu-Mir-145  Mun-Mir-145  Oan-Mir-145  Ocu-Mir-145  Pbv-Mir-145  Pma-Mir-145  Rno-Mir-145  Sha-Mir-145  Spt-Mir-145  Sto-Mir-145  Tgu-Mir-145  Xla-Mir-145-P1  Xla-Mir-145-P2  Xtr-Mir-145 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 2: 122657708-122657767 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-145)		 Mir-145 2: 122657708-122657767 [-] UCSC Ensembl
Mir-143 2: 122658943-122658997 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUCAGACCACCCUUUACUGUGUCCUCGGGGUCCAGUUUUCCCAGGAAUCCCUUAGAUGAUAAGAGGGGGAUUCCUGGAAAUACUGUUCUUGGGGUCAUGGCUCAGCAACUGGUGAUGGU
Get precursor sequence
Structure
        10          20        30        40        50          
UCUCAGACCACCCUUUA--|    U        UC    U  C            UAGAUG 
                   CUGUG CCUCGGGG  CAGU UU CCAGGAAUCCCU      \
                   GGUAC GGGGUUCU  GUCA AA GGUCCUUAGGGG      A
UGGUAGUGGUCAACGACUC^    U        U-    U  A            GAGAAU 
.       110       100        90         80        70
Deep sequencing
Go to detailed chart
CommentThere is a second Dicer cut -2 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sk To Wh
Mature sequence

Aca-Mir-145_5p
mirBase accessionMIMAT0021773
Sequence 
0- GUCCAGUUUUCCCAGGAAUCCCU -23
Get sequence
Star sequence

Aca-Mir-145_3p*
mirBase accessionMIMAT0021774
Sequence 
38- GGAUUCCUGGAAAUACUGUUCU -60
Get sequence