MirGeneDB 2.1
MirGeneDB ID

Aae-Mir-9-P10b

Family name MIR-9 (all species)
Seed CUUUGGU
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-9a-1
Paralogues Aae-Mir-9-P10a  Aae-Mir-9-P11  Aae-Mir-9-P12-v1  Aae-Mir-9-P12-v2  Aae-Mir-9-P13 
Orthologues Bfl-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dan-Mir-9-P10  Dme-Mir-9-P10  Dmo-Mir-9-P10  Dsi-Mir-9-P10  Dya-Mir-9-P10  Esc-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Npo-Mir-9  Obi-Mir-9  Ovu-Mir-9  Pmi-Mir-9  Spu-Mir-9  Tca-Mir-9-o10-v1  Tca-Mir-9-o10-v2  Xbo-Mir-9 
Node of Origin (locus) A. aegypti
Node of Origin (family) Bilateria
Genome context
(Aaeg_L3)		 supercont1.517: 555117-555178 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-9-P10b)		 Mir-9-P10b supercont1.517: 555117-555178 [+] Ensembl
Mir-9-P10a supercont1.517: 574919-574980 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UACUUACUUACCCAAUCGGUGUCAAAGUUCUCUUUGGUUAUCUAGCUGUAUGAGUGAAUUUAGAACAUCAUAAAGCUAGCAUACCGAAGUUAAUAGUUGACUACCAAUCAGCGUUGGAUGGU
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Structure
        10        20          30        40        50        60
UACUUACUUACCCAAUCG  -     A-|  CU       UAU      G     GUGAAU 
                  GU GUCAA  GUU  CUUUGGU   CUAGCU UAUGA      U
                  CA CAGUU  UAA  GAAGCCA   GAUCGA AUACU      U
UGGUAGGUUGCGACUAAC  U     GA^  UU       UAC      A     ACAAGA 
120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
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Mature sequence

Aae-Mir-9-P10b_5p
mirBase accessionMIMAT0014323
Sequence 
0- UCUUUGGUUAUCUAGCUGUAUGA -23
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Star sequence

Aae-Mir-9-P10b_3p*
mirBase accessionNone
Sequence 
39- AUAAAGCUAGCAUACCGAAGUUA -62
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