MirGeneDB 2.1
MirGeneDB ID

Xla-Mir-430-o6b

Family name MIR-430 (all species)
Seed AAGUGCU
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xla-Mir-430-o5o1  Xla-Mir-430-o5o2  Xla-Mir-430-o5p1  Xla-Mir-430-o5p2  Xla-Mir-430-o5q1  Xla-Mir-430-o5q2  Xla-Mir-430-o5r  Xla-Mir-430-o5s  Xla-Mir-430-o6a  Xla-Mir-430-o7a  Xla-Mir-430-o7b  Xla-Mir-430-o8a  Xla-Mir-430-o8b  Xla-Mir-430-o9  Xla-Mir-430-P1a  Xla-Mir-430-P1b  Xla-Mir-430-P3a  Xla-Mir-430-P3b 
Orthologues Dno-Mir-430-P6  Hsa-Mir-430-P6  Mml-Mir-430-P6  Mmu-Mir-430-P6  Rno-Mir-430-P6b  Xtr-Mir-430-o6 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030739.1: 26162703-26162762 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGGGGAGCAAGUCUCCUUGUCAGCCCACUAGCCAGACUGAGGCCCUCUCUUGUUACCAAGUGGGAGUAAGUGCUUUCUAGUUUGGUUAUUGGGCUGACAAACUAUCUACUGGCUGGUUA
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Structure
        10          20        30          40          50       
UGGGGGAGCAAGUCUCC--           C          --     C  --|  UUGUUA 
                   UUGUCAGCCCA UAGCCAGACU  GAGGC CU  CUC      C
                   AACAGUCGGGU AUUGGUUUGA  UUUCG GA  GAG      C
AUUGGUCGGUCAUCUAUCA           U          UC     U  AU^  GGUGAA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Eg He Re St St St St
Star sequence

Xla-Mir-430-o6b_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGCCAGACUGAGGCCCUCUCU -21
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Mature sequence

Xla-Mir-430-o6b_3p
mirBase accessionNone
Sequence 
37- UAAGUGCUUUCUAGUUUGGUUAU -60
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