| MirGeneDB ID | Xla-Mir-383-P2 |
|---|
| Family name |
MIR-383 (all species) |
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| Seed |
GAUCAGA |
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| Species |
African clawed frog (Xenopus laevis) |
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| MiRBase ID |
|
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| Paralogues |
Xla-Mir-383-P1
|
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| Orthologues |
Mun-Mir-383
Spt-Mir-383
|
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| Node of Origin (locus) |
X. laevis
|
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| Node of Origin (family) |
Tetrapoda
|
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Genome context
(GCF_001663975.1_XLA_v2) |
NC_030724.1: 34120806-34120867 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAUACAGGAAACCUCAGUCACUUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUUAGUAGAUAGAAAGCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUUGCCUUUUGCUCCAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CAUACAGGAAACCUCAGU- C-| A AA A UUUAGUAG
CACUUGCUC UC GAUCAG GGUG UUGUGGCU \
GUGAACGAG AG CUGGUC UCAC GACACCGA A
AACCUCGUUUUCCGUUCAU AA^ A CG - CGAAAGAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Xla-Mir-383-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGAUCAGAAGGUGAUUGUGGCU -22
Get sequence
|
|---|
| Star sequence |
Xla-Mir-383-P2_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
41- CCACAGCACUGCCUGGUCAGA -62
Get sequence
|
|---|
