| MirGeneDB ID | Xla-Mir-214-P3-v2 |
|---|
| Family name |
MIR-214 (all species) |
|---|
| Seed |
ACAGCAG |
|---|
| Species |
African clawed frog (Xenopus laevis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Xla-Mir-214-P3-v1
Xla-Mir-214-P4-v1
Xla-Mir-214-P4-v2
|
|---|
| Orthologues |
Lch-Mir-214
Mun-Mir-214
Spt-Mir-214
|
|---|
| Node of Origin (locus) |
X. laevis
|
|---|
| Node of Origin (family) |
Gnathostomata
|
|---|
Genome context
(GCF_001663975.1_XLA_v2) |
NC_030730.1: 98479391-98479453 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGGAUUGGCUGGAAGGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCUCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCUGAAUGACAACCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GGGAUUGGCUGGAAGGA--| U ACA GAACAUC
GUUGUCAUGUG CUGCCUGUCU CUUGCUGUGCA \
CAACAGUACAC GACGGACAGA GGACGACAUGU C
ACCAACAGUAAGUCCGACC^ U CAC CCACUCU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Xla-Mir-214-P3-v2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UGCCUGUCUACACUUGCUGUGCA -23
Get sequence
|
|---|
| Mature sequence |
Xla-Mir-214-P3-v2_3p |
| mirBase accession | None |
|---|
| Sequence |
40- UACAGCAGGCACAGACAGGCAGU -63
Get sequence
|
|---|
