| MirGeneDB ID | Sha-Novel-8 |
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| Family name |
SHA-NOVEL-8 (all species) |
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| Seed |
ACGUGUG |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
S. harrisii
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| Node of Origin (family) |
S. harrisii
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Genome context
(DEVIL_add) |
GL841443.1: 413903-413960 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCAAGCACUUUCUCAGUUGUGCAUGUGUAUAUGUGCAUGCAUAUAGGUACAUAUAUGCAUCUAUUUGCACGUGUGUGCAUGCAUAUGUACACGUGUACAGGCAGGAACUCCCAGGGCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCAAGCACUUUCUCAGU--| G A UAUAUG
UGUGCAUGUGUAUAUGUGCAUGCAUAUA GU CA C
ACAUGUGCACAUGUAUACGUACGUGUGU CA GU A
UCGGGACCCUCAAGGACGG^ G C UUAUCU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Star sequence |
Sha-Novel-8_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AUGUGCAUGCAUAUAGGUACA -21
Get sequence
|
|---|
| Mature sequence |
Sha-Novel-8_3p |
| mirBase accession | None |
|---|
| Sequence |
37- CACGUGUGUGCAUGCAUAUGU -58
Get sequence
|
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