| MirGeneDB ID | Sha-Mir-430-o10 |
| Family name |
MIR-430 (all species) |
| Seed |
CCCUAAC |
| Species |
Tasmanian devil (Sarcophilus harrisii) |
| MiRBase ID |
|
| Paralogues |
Sha-Mir-430-o11
Sha-Mir-430-o12
Sha-Mir-430-o13
Sha-Mir-430-o14
Sha-Mir-430-o15
Sha-Mir-430-o16
Sha-Mir-430-o17
Sha-Mir-430-o18
Sha-Mir-430-o19
Sha-Mir-430-o20
Sha-Mir-430-o21
Sha-Mir-430-o22
Sha-Mir-430-o23
Sha-Mir-430-o24
Sha-Mir-430-o25
Sha-Mir-430-o26
Sha-Mir-430-o27
Sha-Mir-430-o29
Sha-Mir-430-P1
Sha-Mir-430-P2
Sha-Mir-430-P3
Sha-Mir-430-P51
|
| Orthologues |
Hsa-Mir-430-P10
Mml-Mir-430-P10
|
| Node of Origin (locus) |
S. harrisii
|
| Node of Origin (family) |
Vertebrata
|
Genome context (DEVIL_add) |
GL850554.1: 8373-8431 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAAUUGCAGAGGACAUGUCUUUUCUGACACACCCUAACUGAGAGCAUUUAUUGGAUAUUUGGAAAGAUAAGUGCUCUCUUUUUGGGUGAGCCAGGUUGAGGACUAAGCUUCCUAUCAGU
Get precursor sequence
|
| Structure | 10 20 30 40 50
GAAUUGCAGAGGACAUG- U-| ACA U CU GGAUAU
UCUU UCUG CACCC AA GAGAGCAUUUAUU \
GGAG GGAC GUGGG UU CUCUCGUGAAUAG U
UGACUAUCCUUCGAAUCA UU^ CGA U UU AAAGGU
110 100 90 80 70 60 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | No |
Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Mature sequence |
Sha-Mir-430-o10_5p |
| mirBase accession | None |
| Sequence |
0- ACCCUAACUGAGAGCAUUUAUU -22
Get sequence
|
| Co-mature sequence |
Sha-Mir-430-o10_3p |
| mirBase accession | None |
| Sequence |
37- UAAGUGCUCUCUUUUUGGGUGA -59
Get sequence
|