MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-3558

Family name MIR-3558 (all species)
Seed CAUAGAA
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-3558
Paralogues
Orthologues
Node of Origin (locus) R. norvegicus
Node of Origin (family) R. norvegicus
Genome context
(rn6)		 chr6: 10992716-10992779 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCAGCAGCUGGACCUUCACCCGGGCUGUCCAUAGAAGUCAUCCCACAGUGCCUUCAAGGAGGGCAUCGGCACUGUGGAGGGUUUCUAUGUCAGCCUGAGUGGUACAGAUCCAUGCUGGUCUG
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Structure
        10           20        30        40        50        60  
GGGCAGCAGCUGGACCU---|   C       UC       GU AUC          UUCAAGG 
                    UCAC CGGGCUG  CAUAGAA  C   CCACAGUGCC       \
                    GGUG GUCCGAC  GUAUCUU  G   GGUGUCACGG       A
GUCUGGUCGUACCUAGACAU^   A       U-       UG GA-          CUACGGG 
  120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
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Mature sequence

Rno-Mir-3558_5p
mirBase accessionMIMAT0017825
Sequence 
0- CCAUAGAAGUCAUCCCACAGUGCC -24
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Proposed targets TargetScanVert: rno-miR-3558-5p
miRDB: MIMAT0017825
Co-mature sequence

Rno-Mir-3558_3p
mirBase accessionMIMAT0017826
Sequence 
41- CACUGUGGAGGGUUUCUAUGUCA -64
Get sequence
Proposed targets TargetScanVert: rno-miR-3558-3p
miRDB: MIMAT0017826