MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-331

Family name MIR-331 (all species)
Seed CCCCUGG
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-331
Paralogues
Orthologues Bta-Mir-331  Cfa-Mir-331  Cpo-Mir-331  Dno-Mir-331  Ete-Mir-331  Hsa-Mir-331  Mml-Mir-331  Mmu-Mir-331  Ocu-Mir-331 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chr7: 34881110-34881165 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCAGGAGUCUGGUCUUGUUUGGGUUUGUUCUAGGUAUGGUCCCAGGGAUCCCAGAUCAAACCAGGCCCCUGGGCCUAUCCUAGAACCAACCUAAACCCAUGCAUCAUUCCCGGGA
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Structure
        10          20        30        40        50        
CCCAGGAGUCUGGUCUU--|        U        U    U       AU CCAGAU 
                   GUUUGGGUU GUUCUAGG AUGG CCCAGGG  C      \
                   CAAAUCCAA CAAGAUCC UAUC GGGUCCC  G      C
AGGGCCCUUACUACGUACC^        C        -    C       CG ACCAAA 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
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Star sequence

Rno-Mir-331_5p*
mirBase accessionMIMAT0017033
Sequence 
0- CUAGGUAUGGUCCCAGGGAUCC -22
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Proposed targets TargetScanVert: rno-miR-331-5p
miRDB: MIMAT0017033
Mature sequence

Rno-Mir-331_3p
mirBase accessionMIMAT0000570
Sequence 
35- GCCCCUGGGCCUAUCCUAGAA -56
Get sequence
Proposed targets microrna.org: MIMAT0000570
TargetScanVert: rno-miR-331-3p
miRDB: MIMAT0000570