MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-3099

Family name MIR-3099 (all species)
Seed AGGCUAG
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-3099
Paralogues
Orthologues Mmu-Mir-3099 
Node of Origin (locus) Muridae
Node of Origin (family) Muridae
Genome context
(rn6)		 chr1: 70136980-70137039 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCAAGCCUGCUGAGCGAUCGAUCCCCAUCCCAGCUUCCUUCCAGCCCUUGAUGUUUCAGUAUGCACAUAGGCUAGAAAGAGGUUGGGGAUGGGGAAAGAUGAGAGCAUCGGAUGCAGGA
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Structure
        10          20         30        40        50         
CUCAAGCCUGCUGAGCG--   GA       -|        C   C    CU  AUGUUUC 
                   AUC  UCCCCAU CCCAGCUUC UUC AGCC  UG       \
                   UAG  AGGGGUA GGGUUGGAG AAG UCGG  AC       A
AGGACGUAGGCUACGAGAG   AA       G^        A   A    AU  ACGUAUG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
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Star sequence

Rno-Mir-3099_5p*
mirBase accessionNone
Sequence 
0- CCAGCUUCCUUCCAGCCCUUG -21
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Mature sequence

Rno-Mir-3099_3p
mirBase accessionMIMAT0025048
Sequence 
38- UAGGCUAGAAAGAGGUUGGGGA -60
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Proposed targets TargetScanVert: rno-miR-3099
miRDB: MIMAT0025048