MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-129-P2

Family name MIR-129 (all species)
Seed UUUUUGC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-129-1
Paralogues Rno-Mir-129-P1 
Orthologues Aca-Mir-129-P2  Ami-Mir-129-P2  Bta-Mir-129-P2  Cfa-Mir-129-P2  Cli-Mir-129-P2  Cmi-Mir-129-P2  Cpi-Mir-129-P2  Cpo-Mir-129-P2  Dno-Mir-129-P2  Dre-Mir-129-P2a  Dre-Mir-129-P2b  Ete-Mir-129-P2  Gja-Mir-129-P2  Gmo-Mir-129-P2a  Gmo-Mir-129-P2b  Hsa-Mir-129-P2  Lch-Mir-129-P2  Loc-Mir-129-P2  Mal-Mir-129-P2a  Mal-Mir-129-P2b  Mdo-Mir-129-P2  Mml-Mir-129-P2  Mmu-Mir-129-P2  Mun-Mir-129-P2  Oan-Mir-129-P2  Ocu-Mir-129-P2  Pbv-Mir-129-P2  Pma-Mir-129-o2  Sha-Mir-129-P2  Spt-Mir-129-P2  Sto-Mir-129-P2  Tgu-Mir-129-P2  Tni-Mir-129-P2a  Tni-Mir-129-P2b  Xla-Mir-129-P2c  Xla-Mir-129-P2d  Xtr-Mir-129-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Chordata
Genome context
(rn6)		 chr4: 56301731-56301795 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCGACCUUUCCACAGCUGUCUCCUUUGGGUCUUUUUGCGGUCUGGGCUUGCUGUUCUCUCCACAGUAGUCAGGAAGCCCUUACCCCAAAAAGUAUCUGCGGGAGGCUUGGUCUACAGGAGAGACC
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Structure
        10          20        30         40        50        60 
GCGACCUUUCCACAGCU--       U     -|      C   CU      G UGUUCUCUC 
                   GUCUCCU UGGGU CUUUUUG GGU  GGGCUU C         C
                   CGGAGGG GUCUA GAAAAAC CCA  CCCGAA G         A
CCAGAGAGGACAUCUGGUU       C     U^      C   UU      G ACUGAUGAC 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Mature sequence

Rno-Mir-129-P2_5p
mirBase accessionMIMAT0000600
Sequence 
0- CUUUUUGCGGUCUGGGCUUGC -21
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Proposed targets microrna.org: MIMAT0000600
TargetScanVert: rno-miR-129-5p
miRDB: MIMAT0000600
Star sequence

Rno-Mir-129-P2_3p*
mirBase accessionMIMAT0017120
Sequence 
43- AAGCCCUUACCCCAAAAAGUAU -65
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Proposed targets TargetScanVert: rno-miR-129-1-3p
miRDB: MIMAT0017120