| MirGeneDB ID | Pbv-Mir-430-o38 |
|---|
| Family name |
MIR-430 (all species) |
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| Seed |
AAGUGCU |
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| Species |
Burmese python (Python bivittatus) |
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| MiRBase ID |
|
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| Paralogues |
Pbv-Mir-430-o36
Pbv-Mir-430-o37
Pbv-Mir-430-o39
|
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| Orthologues |
Hsa-Mir-430-P38
|
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| Node of Origin (locus) |
P. bivittatus
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(GCA_000186305.2_Python_molurus_bivittatus) |
KE954489.1: 53677-53737 [+]
|
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Precursor
(pre-Mir +30nt flank) |
UUUUUCCAGUGUCCACAGUUCCUGGAGGCAACUUCACCAGGAGUUCUUCUGUGUCAUAACGUGUGCUCCUAAGUGCUCCGUGAUGAAGUGUUUCUGGGAGGCUCAGACAUCCAUUUUGGGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUUUUCCAGUGUCCACAG---| UG A C - U CUGUGUCAUA
UUCC GAGGCA CUUCA CA GGAGU CUU A
GAGG CUUUGU GAAGU GU CCUCG GAA C
CGGGUUUUACCUACAGACUCG^ GU - A G U UCCUCGUGUG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
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| Star sequence |
Pbv-Mir-430-o38_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- ACUUCACCAGGAGUUCUUCUG -21
Get sequence
|
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| Mature sequence |
Pbv-Mir-430-o38_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
39- UAAGUGCUCCGUGAUGAAGUGU -61
Get sequence
|
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