| MirGeneDB ID | Ovu-Novel-90 |
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| Family name |
OCT-NOVEL-90 (all species) |
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| Seed |
CUGACGC |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Obi-Novel-90
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Octopus
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01005660.1: 5089-5149 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUGACCGACCUAUAUUCUGAUAUAAUGAGUAAUUUGGUGUUUGUGUCAACCUGGUAAUAAUUGAAAUAGGCUGACGCUAGUACCAAGUUCCUCAUUAUAAGAAAGCAUUCCAAACGCUUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUGACCGACCUAUAUUCUGA--| U U A GGUAAUA
UAUAAUGAG AAUUUGGUGUU GUGUCA CCU \
AUAUUACUC UUGAACCAUGA CGCAGU GGA A
UAUUCGCAAACCUUACGAAAGA^ C U C UAAAGUU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Novel-90_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AAUUUGGUGUUUGUGUCAACCU -22
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-90_3p |
| mirBase accession | None |
|---|
| Sequence |
39- GCUGACGCUAGUACCAAGUUCC -61
Get sequence
|
|---|
