| MirGeneDB ID | Ovu-Novel-9-v2 |
|---|
| Family name |
CEP-NOVEL-9 (all species) |
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| Seed |
GGAUCUU |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
Ovu-Novel-9-v1
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| Orthologues |
Npo-Novel-9
Obi-Novel-9-v2
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| Node of Origin (locus) |
Cephalopoda
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| Node of Origin (family) |
Cephalopoda
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01074648.1: 88005-88068 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGCUGUUACAGAAGUCAGCCAUUUGUAUGCAGUUAGUGGUAAAGCCCUUGCAUUAGGUAUCUGAAGUGUUGCAGGAUCUUUAGUCACUAGCUGCAUAAGGAUGGUACCGUACAUCAUGUGAUAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UGCUGUUACAGAAGUCA-- UG -| CC AUUAGGUAU
GCCAUU UAUGCAGUUAGUGG UAAAG CUUGC \
UGGUAG AUACGUCGAUCACU AUUUC GGACG C
CAUAGUGUACUACAUGCCA GA G^ UA UUGUGAAGU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Novel-9-v2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGUUAGUGGUAAAGCCCUUGC -21
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-9-v2_3p |
| mirBase accession | None |
|---|
| Sequence |
42- AGGAUCUUUAGUCACUAGCUGC -64
Get sequence
|
|---|
