| MirGeneDB ID | Ovu-Novel-87-v2 |
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| Family name |
OCT-NOVEL-87 (all species) |
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| Seed |
UGAGCAA |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
Ovu-Novel-87-v1
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| Orthologues |
Obi-Novel-87-v2
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Octopus
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01012207.1: 1451429-1451487 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGGAACGAUGAGUGAAAAGCCUGGAAAAGUCUGAGCAAAGGAAAUGUUAGGCCGUAAAAUAUUCCUGGCAGCAUGUUCUUUUCUCUGAUUAGUCCAGGUUUCAAACAAUCGCGUGGAAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGGAACGAUGAGUGAAA--| AA U C A AG UAAAA
AGCCUGGA AGUC GAG AAAGGA AUGUU GCCG \
UUGGACCU UUAG CUC UUUCUU UACGA CGGU U
AAAGGUGCGCUAACAAACU^ GA U U G -- CCUUA
110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Mature sequence |
Ovu-Novel-87-v2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CUGAGCAAAGGAAAUGUUAGGCCG -24
Get sequence
|
|---|
| Star sequence |
Ovu-Novel-87-v2_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- GCAGCAUGUUCUUUUCUCUGAU -59
Get sequence
|
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